Troubleshooting

Here are few know issue and how to troubleshoot them.

Pytorch not compiled with CUDA

Fix by reinstall pytorch pre-build with CUDA:

pip uninstall pytorch

or

conda uninstall torch

and follow instruction for Pytorch website on how to install current pytorch version with CUDA on your system.

This could be because TARDIS could not find any know object (e.g. membrane or microtubules) in your tomogram or micrograph.

You can try to reduce -ct <float; default 0.25> to 0.1 or 0.05. If this wont help, please contact Developers.